December 16, 2012 New lib BioParser | ||||
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Dear, I wrote some parser for biology purpose. Goal: - Parser should not load the file in memory - be efficient - use Memory mapped file more as possible Simen get a good point, module shown into learn section could interest some developer. For this reason i create an organization into github named bioparser-developers . Then you are all welcome to fork,fix,commit to the project bioparser: https://github.com/bioparser-developers/bioparser/tree/master/src/parser I do not know if we should have a more generic name and add other format than biology. You have the power to choose and contribute :) Current supported format: - Fasta mmfile yes - Fasta mmfile yes - UCSC mmfile no - matrix mmfile no Note: matrix file is not a standard just data stored into a file as: [ [1, 2, 3], [4, 5, 6] ] stored too 1 2 3 4 5 6 thanks to all |
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