Package.d is a real problem existing on our currently modules design. First is that it means to take the directory name to use as a module.
This is a problem for 3 reasons:
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You won't be able to find your module by the file name. This is incredibly common, for instance, in Visual Studio Code, when you hit CTRL+P and type the file name, nope, you will need to write path/to/folder/package.d, beyond that, when you search package.d there will be so many files with the same name.
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As being an exception to how the module system works, this has already caused me a few headaches (inexplicable bugs), that happens with symbols aliasing, when the time it happened, I had no idea on what it could be and I don't even remember how I solved, instead, I only knew it was related to package.d.
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I'm currently having a bug on my API module that every duplicated file name, even when located at different directories(modules), are generating duplicate symbol. The major problem is that this is currently undebuggable, as the MSVC Linker does not show the full directory of the libraries/object files that caused this clash, not even the symbol!
The duplicate symbol currently only happens in MSVC Linker, which makes me think if the bug is in the D language or the linker itself, as on LLD this does not happen.
So, my current advice is always try making your file names unique, this will bring a much better debuggability in your project.